BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016F05LP1|AL427041
(887 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig940 198 1e-50
3x_Contig210 115 1e-25
>3x_Contig940
Length = 3845
Score = 198 bits (100), Expect = 1e-50
Identities = 100/100 (100%)
Strand = Plus / Minus
Query: 1 gatcaattgataaatgtattattgtgtgtccatcatctttagtcaacaattgggcaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 gatcaattgataaatgtattattgtgtgtccatcatctttagtcaacaattgggcaaatg 54
Query: 61 aaattgacaaatggttgggaccaggttctctttcttcatt 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 aaattgacaaatggttgggaccaggttctctttcttcatt 14
>3x_Contig210
Length = 1662
Score = 115 bits (58), Expect = 1e-25
Identities = 68/70 (97%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 816 cgattatcaatcttctgttgactcccgcacttcaagaaatagaagcgttattcagacagc 875
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1662 cgattatcaatcttctgt-gactcccgcacttcaggaaatagaagcgttattcagacagc 1604
Query: 876 tttttccagt 885
||||||||||
Sbjct: 1603 tttttccagt 1594
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6976
Number of Sequences: 1807
Number of extensions: 6976
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 2
length of query: 887
length of database: 10,358,551
effective HSP length: 16
effective length of query: 871
effective length of database: 10,329,639
effective search space: 8997115569
effective search space used: 8997115569
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)